The detailed information of tRNA gene sequence


Sequence ID>SRA1001887
Genome IDSRR001308.110845
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 242
End posion on genome 169
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
cgctctctat
tRNA gene sequence 
TGCCCGATCGTCTAATGGCAGGACTACTGATTTTGGTTCAGTGTGTATAGGTTCGAATCC
TGTTCGGGCAACAA
Downstream region at tRNA end position 
ttaaaggcct
Secondary structure (Cloverleaf model)
>SRA1001887	Gln	TTG
                   t      ACAA ttaaaggcct
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     T G T C C     A
        A A        C      | + | | |     G
      T     T C T G       A T A G G     C
      G     + | | |                 T T
      G     G G A C
        C A        T     GTGT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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