The detailed information of tRNA gene sequence


Sequence ID>SRA1001889
Genome IDSRR001308.111854
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 161
End posion on genome 86
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccaagaaatt
tRNA gene sequence 
GGGGCCGTAGCTCAGATGGGAGAGCGCGTCGTTCGCAATGACGAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
tttttcgggt
Secondary structure (Cloverleaf model)
>SRA1001889	Ala	CGC
                   t      ACCA tttttcgggt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      A G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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