The detailed information of tRNA gene sequence


Sequence ID>SRA1001891
Genome IDSRR001308.112274
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 106
End posion on genome 31
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaaaccccaa
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCGTGCTTTGCAAGCATGAGGTCATCGGTTCGATC
CCGTTCAGCTCCACCA
Downstream region at tRNA end position 
agccttcgcc
Secondary structure (Cloverleaf model)
>SRA1001891	Ala	TGC
                   a      ACCA agccttcgcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G + T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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