The detailed information of tRNA gene sequence


Sequence ID>SRA1001892
Genome IDSRR001308.112790
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 180
End posion on genome 104
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggagatgaa
tRNA gene sequence 
GGGCCTATAGCTCAGACGGTTAGAGCACCTGACTCATAATCAGGTGGTCCTTGGTTCGAT
CCCAAGTGGGCCCACCA
Downstream region at tRNA end position 
gttgcaagtt
Secondary structure (Cloverleaf model)
>SRA1001892	Met	CAT
                   a      ACCA gttgcaagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C T
                    T     G A A C C     A
      A G A        A      | | | | |     G
    C       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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