The detailed information of tRNA gene sequence


Sequence ID>SRA1001893
Genome IDSRR001308.112936
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 177
End posion on genome 253
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
agtgtcccat
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGCGCTACGTTCGGGACGTAGAAGTCGCAAGTTCGAA
TCCTGTCACCCCGACAA
Downstream region at tRNA end position 
ttcaagcagt
Secondary structure (Cloverleaf model)
>SRA1001893	Pro	CGG
                   t      ACAA ttcaagcagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | |   |     G
    C       C T C G       G C A A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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