The detailed information of tRNA gene sequence


Sequence ID>SRA1001895
Genome IDSRR001308.114034
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 251
End posion on genome 176
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gggtgttcgc
tRNA gene sequence 
GGCTCCGTAGCTCAGAGGATAGAGCGCCTCCGTCCTAAGGAGGGCGTCGGGGGTTCGATT
CCCTCCGGGGCCGCCA
Downstream region at tRNA end position 
cgattttgaa
Secondary structure (Cloverleaf model)
>SRA1001895	Arg	CCT
                   c      GCCA cgattttgaa
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T T
                    T     C T C C C     A
      A G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     GCGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  G       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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