The detailed information of tRNA gene sequence


Sequence ID>SRA1001899
Genome IDSRR001308.116376
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 269
End posion on genome 196
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ncccgctatg
tRNA gene sequence 
GCGTCTGTGGTGTAAGGGTTTGCACAGGAGGCTGTGAACCTCTTGGTCCTGGGTTCGACT
CCCGGTAGACGCCCtc
Downstream region at tRNA end position 
tcttgttccc
Secondary structure (Cloverleaf model)
>SRA1001899	His	GTG
                   g      CCtc tcttgttccc
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A
                     G + T          T C
                    T     G G C C C     A
      G A A        G      | + | | |     G
    G       T G T G       C T G G G     C
    G       + | | |                 T T
    T       G C A C
      T T          A     TGGTC
                    G + T
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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