The detailed information of tRNA gene sequence


Sequence ID>W1810047121
Genome IDOMOE01000067
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophobacter sp. SbD1 SbD1 Peat soil MAG SbD1 [OMOE]
Start position on genome 30827
End posion on genome 30900
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaagttgg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCCCTGGTTCAAA
TCCAGGCCCCGCTAtca
Downstream region at tRNA end position 
agaaaaataa
Secondary structure (Cloverleaf model)
>W1810047121	Met	CAT
                   g      Atca agaaaaataa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G A C C     A
      T G A        G      | | | | |     A
    C       C G A G       C C T G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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