The detailed information of tRNA gene sequence


Sequence ID>W1810047128
Genome IDOMOE01000106
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophobacter sp. SbD1 SbD1 Peat soil MAG SbD1 [OMOE]
Start position on genome 20500
End posion on genome 20591
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttccctttt
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGTTGTTCCGTTTGCGCGG
AACCGTGGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
gataaaatat
Secondary structure (Cloverleaf model)
>W1810047128	Ser	TGA
                   t      GCCA gataaaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTTCCGTTTGCGCGGAACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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