The detailed information of tRNA gene sequence


Sequence ID>W1810047129
Genome IDOMOE01000106
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophobacter sp. SbD1 SbD1 Peat soil MAG SbD1 [OMOE]
Start position on genome 20605
End posion on genome 20698
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaatattaa
tRNA gene sequence 
GGAGAGATGGCCGAGTCGGCTGAAGGCGCTCGCCTGCTAAGCGAGTGTAGGGTGTAAAGC
TCTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cccagacaac
Secondary structure (Cloverleaf model)
>W1810047129	Ser	GCT
                   a      GCCA cccagacaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTAGGGTGTAAAGCTCTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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