The detailed information of tRNA gene sequence


Sequence ID>W1810047144
Genome IDOMOE01000146
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophobacter sp. SbD1 SbD1 Peat soil MAG SbD1 [OMOE]
Start position on genome 8696
End posion on genome 8794
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tcaacgtttt
tRNA gene sequence 
GGAAGCGCCAAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGGGGGCGTGAAG
GCGTTCCCAGGTGGGTTCGATTCCCATGCGCTTCCGCCA
Downstream region at tRNA end position 
acgatctaca
Secondary structure (Cloverleaf model)
>W1810047144	Sec	TCA
                   t      GCCA acgatctaca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGGGGGCGTGAAGGCGTTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK