The detailed information of tRNA gene sequence


Sequence ID>SRA1001900
Genome IDSRR001308.116691
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 173
End posion on genome 97
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctggacgcgg
tRNA gene sequence 
CGGGGTATAGCTCAGCCTGGTAGAGCGCCAGCTTTGGGAGCTGGACGTCGGGAGTTCGAA
TCCCCCTACCCCGACCA
Downstream region at tRNA end position 
accggctggc
Secondary structure (Cloverleaf model)
>SRA1001900	Pro	TGG
                   g      ACCA accggctggc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | |   |     G
    C       C T C G       G G G A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ACGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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