The detailed information of tRNA gene sequence


Sequence ID>W1810047232
Genome IDOMOG01000267
Search identical group
Phylum/ClassAcidobacteriota
SpeciesCandidatus Sulfopaludibacter sp. SbA4 SbA4 Peat soil MAG SbA4 [OMOG]
Start position on genome 9352
End posion on genome 9258
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
caatcgccct
tRNA gene sequence 
GGAAGCCATTCTTGGCCGGTGCTGGGCGCGGGCTTCAAACCCGTTGTGCGGTACTTTGTG
TCGCGGGTGGGTTCGACTCCCACTGGCTTCCGCCA
Downstream region at tRNA end position 
tccaactatt
Secondary structure (Cloverleaf model)
>W1810047232	Sec	TCA
                   t      GCCA tccaactatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     C - G
                     A - T          T C
                    T     C A C C C     A
      C C G        T      | | | | |     G
    G       G T T C       G T G G G     C
    G       + + + |                 T T
    T       T G G G
      G C          C     TGTGCGGTACTTTGTGTCGCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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