The detailed information of tRNA gene sequence


Sequence ID>SRA1001902
Genome IDSRR001308.117113
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 176
End posion on genome 103
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tataaataac
tRNA gene sequence 
GCGCCTGTAGCTCAGATGGCAGAGCAGAGGACTTTTAATCCTTGTGTCATAGGTTCGATT
CCTGTCAGGCGCACtt
Downstream region at tRNA end position 
ttaagcacta
Secondary structure (Cloverleaf model)
>SRA1001902	Lys	TTT
                   c      ACtt ttaagcacta
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     T G T C C     A
      A G A        A      | + | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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