The detailed information of tRNA gene sequence


Sequence ID>SRA1001910
Genome IDSRR001308.122384
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 93
End posion on genome 167
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggatcgccac
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTCAGAGCGCACGACTCATAATCGTGAGGTCGCGGGATCGAG
CCCCGCTCCCGCTACtg
Downstream region at tRNA end position 
cttccggcag
Secondary structure (Cloverleaf model)
>SRA1001910	Met	CAT
                   c      ACtg cttccggcag
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          C G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 A T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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