The detailed information of tRNA gene sequence


Sequence ID>SRA1001917
Genome IDSRR001308.126493
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 51
End posion on genome 127
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cactgcgcgc
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCTTCGGTTCAAG
TCCGAACAGACCCACCA
Downstream region at tRNA end position 
tataacctct
Secondary structure (Cloverleaf model)
>SRA1001917	Met	CAT
                   c      ACCA tataacctct
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     A A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       T T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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