The detailed information of tRNA gene sequence


Sequence ID>SRA1001918
Genome IDSRR001308.129883
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 175
End posion on genome 101
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aaactctatc
tRNA gene sequence 
GCCTATGTAGCTCAGTGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCGAGGGTTCAATTC
CCTTCATCGGCTCAA
Downstream region at tRNA end position 
attattaaaa
Secondary structure (Cloverleaf model)
>SRA1001918	Thr	GGT
                   c      TCAA attattaaaa
                     G - C
                     C - G
                     C - G
                     T   C
                     A - T
                     T - A
                     G - C          T T
                    T     T T C C C     A
        G A        A      + | | | |     A
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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