The detailed information of tRNA gene sequence


Sequence ID>SRA1001921
Genome IDSRR001308.133726
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 137
End posion on genome 211
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ataataattA
tRNA gene sequence 
GCCTGTTTAGCTTAGTTGGTAGAGCATTTGCCTCGTAAGCAAAAGGCCAAGGGTTCGACT
CCCTTAACAGGCTTtt
Downstream region at tRNA end position 
ttactacaaa
Secondary structure (Cloverleaf model)
>SRA1001921	Thr	CGT
                   A      TTtt ttactacaaa
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A
                     T - A          T C
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       T T C G       A A G G G     C
    G       + | | |                 T T
    G       G A G C
      T A          A     AGGCC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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