The detailed information of tRNA gene sequence


Sequence ID>SRA1001923
Genome IDSRR001308.134882
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 106
End posion on genome 180
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgatttcat
tRNA gene sequence 
GGCGAGGTAGCTCAGATGGTTAGAGCGCAGGATTCATAACCCTGAGGTCAGGAGTTCAAT
TCTCCTTCTCGCTACtt
Downstream region at tRNA end position 
taagaaaccc
Secondary structure (Cloverleaf model)
>SRA1001923	Met	CAT
                   t      ACtt taagaaaccc
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T T
                    T     T C C T C     A
      A G A        A      | | | | |     A
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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