The detailed information of tRNA gene sequence


Sequence ID>SRA1001927
Genome IDSRR001308.136005
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 162
End posion on genome 76
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ttcacatttt
tRNA gene sequence 
GGCCACGTGTTGAAATTGGTAGACAAGCTACTTTGAGGTGGTAGTACCCGAAACGGTGTG
CTGGTTCGAGTCCAGTCGTGGTCACAA
Downstream region at tRNA end position 
aagtctgaag
Secondary structure (Cloverleaf model)
>SRA1001927	Leu	GAG
                   t      ACAA aagtctgaag
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T G
                    T     T G A C C     A
      T A A        G      + | | | |     G
    T       A G T T       G C T G G     C
    G         | | |                 T T
    G       A C A A
      T A G        G     TACCCGAAACGGTGT
                    C - G
                    T - A
                    A - T
                    C - G
                    T + G
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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