The detailed information of tRNA gene sequence


Sequence ID>SRA1001929
Genome IDSRR001308.136520
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 158
End posion on genome 230
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atttgtgatc
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCNCTGGTTCGATT
CCAGTCAGCTCCAacc
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001929	Ala	TGC
                   c      Aacc gnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T G A C C     A
      T G A        A        | | | |     G
    T       C T C G       N C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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