The detailed information of tRNA gene sequence


Sequence ID>SRA1001933
Genome IDSRR001308.138366
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 157
End posion on genome 84
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tttgccccgt
tRNA gene sequence 
GCGGGAGTAGTTCAATGGTAGAACCCTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCC
CGTCTCCCGCTCCA
Downstream region at tRNA end position 
cgcgatggtt
Secondary structure (Cloverleaf model)
>SRA1001933	Gly	TCC
                   t      TCCA cgcgatggtt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G C C C     A
        A A        A      + | | | |     G
      T     C T T G       G C G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        C     TGAC
                    C   A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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