The detailed information of tRNA gene sequence


Sequence ID>SRA1001936
Genome IDSRR001308.139935
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 87
End posion on genome 160
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
gccacagact
tRNA gene sequence 
GCGGGCATCGTTCAATGGCAGGACCTGAGTTTCCCATACTCAAGATGAGGGTTCGATTCC
CTTTGCCCGCTCCA
Downstream region at tRNA end position 
cgcatcaccc
Secondary structure (Cloverleaf model)
>SRA1001936	Gly	CCC
                   t      TCCA cgcatcaccc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     T T C C C     A
        A A        C      + | | | |     G
      T     C T T G       G A G G G     C
      G     | + | |                 T T
      G     G G A C
        C A        C     AGAT
                    T - A
                    G - C
                    A - T
                    G - C
                    T - A
                  T       T
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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