The detailed information of tRNA gene sequence


Sequence ID>SRA1001938
Genome IDSRR001308.140911
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 175
End posion on genome 101
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gttaagaaat
tRNA gene sequence 
GGCCCCATCGTCTAGCGGCTAGGACGACAGCCTTTCAAGCTGTAGACCGGAGTTCGATTC
TCCGTGGGGTCACTA
Downstream region at tRNA end position 
agccttcgcc
Secondary structure (Cloverleaf model)
>SRA1001938	Glu	TTC
                   t      ACTA agccttcgcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C T C     A
      C G A        C      | | | | |     G
    G       T C T G       C G G A G     C
    G       + | | |                 T T
    C       G G A C
      T A          G     AGAC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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