The detailed information of tRNA gene sequence


Sequence ID>SRA1001939
Genome IDSRR001308.140926
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 131
End posion on genome 206
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcgtgctgt
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTAGAGCAGCGGACTCATAAGCCGCGGGTCACCCGTTCAATC
CGGGTCACCGCCACCA
Downstream region at tRNA end position 
aatttccagc
Secondary structure (Cloverleaf model)
>SRA1001939	Met	CAT
                   t      ACCA aatttccagc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T G G G C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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