The detailed information of tRNA gene sequence


Sequence ID>SRA1001943
Genome IDSRR001308.142899
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 82
End posion on genome 7
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gagatcaatg
tRNA gene sequence 
GTGGGCGTAGCTCAACTGGTAGAGCCGTCGGCTGTGACCCGGCGGGTTGCGGGTTCGATC
CCCGTCGTCCACCCCA
Downstream region at tRNA end position 
gtcaacnnnn
Secondary structure (Cloverleaf model)
>SRA1001943	His	GTG
                   g      CCCA gtcaacnnnn
                     G - C
                     T - A
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          C T
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     GGGTT
                    G - C
                    T + G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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