The detailed information of tRNA gene sequence


Sequence ID>SRA1001953
Genome IDSRR001308.145657
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 120
End posion on genome 196
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aagttgaaat
tRNA gene sequence 
CGGAGCATAGCACAGCCTGGTAGTGCACCTGGTTTGGGACCAGGGGGTCGTAGGTTCGAA
TCCTACTGCTCCGACCA
Downstream region at tRNA end position 
tttattgaaa
Secondary structure (Cloverleaf model)
>SRA1001953	Pro	TGG
                   t      ACCA tttattgaaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    C       C A C G       G T A G G     C
    T       | | | |                 T T
    G       G T G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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