The detailed information of tRNA gene sequence


Sequence ID>SRA1001955
Genome IDSRR001308.147272
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 203
End posion on genome 116
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccccgccttc
tRNA gene sequence 
GGAAGTGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGACCCGAAAGGGTCC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
gatcaaacca
Secondary structure (Cloverleaf model)
>SRA1001955	Ser	TGA
                   c      GCCA gatcaaacca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGACCCGAAAGGGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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