The detailed information of tRNA gene sequence


Sequence ID>SRA1001958
Genome IDSRR001308.148885
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 254
End posion on genome 175
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
taactaaaac
tRNA gene sequence 
GCCGAAGTGGCGGAATGGTAGACGCGCACGACTCAAACTCGTGTATGCAAGTGTGTGGGT
TCGAGTCCCACCTTCGGTACtt
Downstream region at tRNA end position 
ctttattaaa
Secondary structure (Cloverleaf model)
>SRA1001958	Leu	CAA
                   c      ACtt ctttattaaa
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TATGCAAGTGT
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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