The detailed information of tRNA gene sequence


Sequence ID>SRA1001965
Genome IDSRR001308.151938
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 112
End posion on genome 187
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccttttgg
tRNA gene sequence 
GGCGGTGTAGCTCAGTCGGTAGAGCAGAGGAATCATAATCCTTGTGTCGGGGGTTCAAAT
CCCTCCACCGCCACCA
Downstream region at tRNA end position 
taccagattt
Secondary structure (Cloverleaf model)
>SRA1001965	Met	CAT
                   g      ACCA taccagattt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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