The detailed information of tRNA gene sequence


Sequence ID>W1810053810
Genome IDPDEP01000002
Search identical group
Phylum/ClassRhodothermota
SpeciesLongimonas halophila KCTC 42399 [PDEP]
Start position on genome 258277
End posion on genome 258188
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taccataaac
tRNA gene sequence 
GGAGGGGTGCCCGAGCGGTCGAAGGGGCTCGCCTGGAAAGCGAGTGTACCGTTTACGCGG
TACCGGGGGTTCGAATCCCTCCCTCTCCGCat
Downstream region at tRNA end position 
caactctctg
Secondary structure (Cloverleaf model)
>W1810053810	Ser	GGA
                   c      GCat caactctctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C C       G G G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TGTACCGTTTACGCGGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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