The detailed information of tRNA gene sequence


Sequence ID>W1810053837
Genome IDPDEP01000012
Search identical group
Phylum/ClassRhodothermota
SpeciesLongimonas halophila KCTC 42399 [PDEP]
Start position on genome 30212
End posion on genome 30286
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atacaaatat
tRNA gene sequence 
CGCGGGGTAGAGCAGTTTGGTAGCTCATCGGGCTCATAACCCGAAGGTCGCAGGTTCGAA
TCCTGCCCCCGCTACta
Downstream region at tRNA end position 
cccacggtcg
Secondary structure (Cloverleaf model)
>W1810053837	Met	CAT
                   t      ACta cccacggtcg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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