The detailed information of tRNA gene sequence


Sequence ID>SRA1001968
Genome IDSRR001308.154853
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 4
End posion on genome 78
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnnnnccc
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGTAGAGCACTGCCTTCACACGGCAGGGGTCGCAGGTTCGAACC
CTGCACCGCCCACCA
Downstream region at tRNA end position 
agacaagagc
Secondary structure (Cloverleaf model)
>SRA1001968	Val	CAC
                   c      ACCA agacaagagc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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