The detailed information of tRNA gene sequence


Sequence ID>W1810054357
Genome IDPDFD01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPiscirickettsia salmonis S-GIM [PDFD]
Start position on genome 5509
End posion on genome 5434
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tcccgctatt
tRNA gene sequence 
GCCGGTATAGCTCAGCTGGTAGAGCAACTGATTTGTAATCAGTAGGTCCCGAGTTCGACT
CTTGGTGCCGGCACCA
Downstream region at tRNA end position 
gatattcaaa
Secondary structure (Cloverleaf model)
>W1810054357	Thr	TGT
                   t      ACCA gatattcaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T C
                    T     G G T T C     A
      C G A        A      | | + | |     G
    T       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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