The detailed information of tRNA gene sequence


Sequence ID>SRA1001977
Genome IDSRR001308.160643
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 82
End posion on genome 9
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
attgctccgg
tRNA gene sequence 
GCCCCCGTAGCATGAAGGTCGTGCAGTTGATTTGTAATCATCAGGTAGCGGTTCGATTCC
GTTCGGGGGCACCA
Downstream region at tRNA end position 
gttaaatcnn
Secondary structure (Cloverleaf model)
>SRA1001977	Thr	TGT
                   g      ACCA gttaaatcnn
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T T G C C     A
        A G        A      | + | | |     G
      A     T A C G       A G C G G     C
      G     + | | |                 T T
      G     G T G C
        T C        A     AGGT
                    G - C
                    T   T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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