The detailed information of tRNA gene sequence


Sequence ID>SRA1001984
Genome IDSRR001308.166295
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 10
End posion on genome 86
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ncaatatatg
tRNA gene sequence 
GCGGCCATAGCTCAGTTGGTTAGAGCGTCGGACTGTGAATCCGAAGGTCGAGGGTTCGAG
CCCCTTTGGCCGCCCCA
Downstream region at tRNA end position 
tttcttactt
Secondary structure (Cloverleaf model)
>SRA1001984	His	GTG
                   g      CCCA tttcttactt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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