The detailed information of tRNA gene sequence


Sequence ID>SRA1001987
Genome IDSRR001308.167538
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 105
End posion on genome 175
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaagaattaa
tRNA gene sequence 
GCGCCCGTCGTACAATGGTAGTACAGTCGCCTGATAAGCGATAAACGAAAGTTCGATTCT
TTCCGGGCGCAtcc
Downstream region at tRNA end position 
attgagactt
Secondary structure (Cloverleaf model)
>SRA1001987	Ile	GAT
                   a      Atcc attgagactt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C T T T C     A
        A A        C      | | | | |     G
      T     C A T G       G A A A G     C
      G     | | | |                 T T
      G     G T A C
        T A        A     AAAC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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