The detailed information of tRNA gene sequence


Sequence ID>SRA1001988
Genome IDSRR001308.167728
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 224
End posion on genome 140
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gttctttaat
tRNA gene sequence 
GCCCGGGTGGAGAAATTGGTAGACTTACCAGATTCAGGTTCTGGCGCTGTAAAAGGCATG
CAGGTTCGAGTCCTGTTCCGGGCACtt
Downstream region at tRNA end position 
ttttatttta
Secondary structure (Cloverleaf model)
>SRA1001988	Leu	CAG
                   t      ACtt ttttatttta
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       A G A G       G C A G G     C
    G         | | +                 T T
    G       A C T T
      T A G        A     CGCTGTAAAAGGCAT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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