The detailed information of tRNA gene sequence


Sequence ID>SRA1001989
Genome IDSRR001308.168303
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 264
End posion on genome 188
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nccgaagact
tRNA gene sequence 
AGGCCAGTAGACTCAATTGGCAGAGCGGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAT
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ccttcaggca
Secondary structure (Cloverleaf model)
>SRA1001989	Trp	CCA
                   t      GCCA ccttcaggca
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       T C A G       G G G G G     C
    T       +     |                 T T
    G       G A G C
      G C A        G     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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