The detailed information of tRNA gene sequence


Sequence ID>SRA1001994
Genome IDSRR001308.169987
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 139
End posion on genome 215
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcccatcaac
tRNA gene sequence 
GGACCGGTAGTTCAGTCGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCGGTCCGCCA
Downstream region at tRNA end position 
tgcatcttgt
Secondary structure (Cloverleaf model)
>SRA1001994	Asp	GTC
                   c      GCCA tgcatcttgt
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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