The detailed information of tRNA gene sequence


Sequence ID>SRA1001997
Genome IDSRR001308.171081
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 159
End posion on genome 235
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagccgcagg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCAACCA
Downstream region at tRNA end position 
gttagattcg
Secondary structure (Cloverleaf model)
>SRA1001997	Met	CAT
                   g      ACCA gttagattcg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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