The detailed information of tRNA gene sequence


Sequence ID>SRA1001999
Genome IDSRR001308.172306
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 95
End posion on genome 171
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgggcagctg
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAG
ACCAACCAGACCCACCA
Downstream region at tRNA end position 
gagccaccaa
Secondary structure (Cloverleaf model)
>SRA1001999	Ile	GAT
                   g      ACCA gagccaccaa
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          A G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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