The detailed information of tRNA gene sequence


Sequence ID>SRA1002001
Genome IDSRR001308.173502
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 266
End posion on genome 190
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggtccgttta
tRNA gene sequence 
GGGGCGGTAGTTAAGTCGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCCGCCCCGCAA
Downstream region at tRNA end position 
ccaaacgacg
Secondary structure (Cloverleaf model)
>SRA1002001	Asp	GTC
                   a      GCAA ccaaacgacg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       A T T G       G C G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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