The detailed information of tRNA gene sequence


Sequence ID>SRA1002002
Genome IDSRR001308.174227
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 195
End posion on genome 267
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
accgctgccc
tRNA gene sequence 
GGGCGGGTAGCTCAGCGGCTAGAGCGTTCGCCTTACACGCGAAGGGTCCGGGGTTCGAAT
CCCCGCCTGCCCAttg
Downstream region at tRNA end position 
atcgtannnn
Secondary structure (Cloverleaf model)
>SRA1002002	Val	TAC
                   c      Attg atcgtannnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    C       G A G C
      T A          G     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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