The detailed information of tRNA gene sequence


Sequence ID>SRA1002003
Genome IDSRR001308.176473
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 239
End posion on genome 152
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aaagttcgct
tRNA gene sequence 
GCCGGAGTGGCGAAATTGGTATACGCACCAGACTCAAAATCTGACGAGGTTCACCCTCAT
GTCGGTTCGACTCCGACCTCCGGCACCA
Downstream region at tRNA end position 
tcctttaacc
Secondary structure (Cloverleaf model)
>SRA1002003	Leu	CAA
                   t      ACCA tcctttaacc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       A G C G       G T C G G     C
    G         | | |                 T T
    G       A C G C
      T A T        A     CGAGGTTCACCCTCAT
                    C   A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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