The detailed information of tRNA gene sequence


Sequence ID>SRA1002004
Genome IDSRR001308.179174
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 63
End posion on genome 137
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tccccaccct
tRNA gene sequence 
GCTCCGGTGGCGCAACTGGATAGCGCAATCCCCTCCTAAGGGATAGGTTACAGGTTCAAG
TCCTGTCCGGGGCACat
Downstream region at tRNA end position 
gactgataat
Secondary structure (Cloverleaf model)
>SRA1002004	Arg	CCT
                   t      ACat gactgataat
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      C A A        G      | | | | |     A
    T       C G C G       A C A G G     C
    G       | | | |                 T T
    G       G C G C
      A T A        A     AGGTT
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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