The detailed information of tRNA gene sequence


Sequence ID>SRA1002019
Genome IDSRR001308.186040
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 199
End posion on genome 276
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaattccct
tRNA gene sequence 
GGCGGTGTAGCTTAACCGGATTAAAGCGTCGGTCTCATAAACCGAAGATTAAAGGTTCAA
ATCCTTTCACCGCAACCA
Downstream region at tRNA end position 
tttctattta
Secondary structure (Cloverleaf model)
>SRA1002019	Met	CAT
                   t      ACCA tttctattta
                     G   A
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
    C C A A        A      | | | | |     A
  G         T T C G       A A A G G     C
  G         | | | |                 T T
  A         A A G C
    T T A          G     AGATT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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