The detailed information of tRNA gene sequence


Sequence ID>SRA1002024
Genome IDSRR001308.192527
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 236
End posion on genome 160
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acctgcaatg
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGTGTGTTCGAA
TCACACCGCCCCGACCA
Downstream region at tRNA end position 
ccgaaaccca
Secondary structure (Cloverleaf model)
>SRA1002024	Pro	TGG
                   g      ACCA ccgaaaccca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C A C     A
      C G A        A      | | | | |     G
    C       C G C G       G T G T G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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