The detailed information of tRNA gene sequence


Sequence ID>SRA1002030
Genome IDSRR001308.195994
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 154
End posion on genome 82
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tggttgtatg
tRNA gene sequence 
GCGTTGTTCGTCTAATGGCTAAGACACGAGATTGTGAATCTCGTTATACGGGTTCGACTC
CCGTACATCGCCCtg
Downstream region at tRNA end position 
atttacccgg
Secondary structure (Cloverleaf model)
>SRA1002030	His	GTG
                   g      CCtg atttacccgg
                     G - C
                     C - G
                     G - C
                     T   T
                     T - A
                     G - C
                     T - A          T C
                    T     T G C C C     A
      T A A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       | | | |                 T T
    C       A G A C
      T A          A     TTAT
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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