The detailed information of tRNA gene sequence


Sequence ID>SRA1002032
Genome IDSRR001308.197420
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 155
End posion on genome 79
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgttcgcctt
tRNA gene sequence 
GGGGTCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCGACCCCGCCA
Downstream region at tRNA end position 
cttactcggt
Secondary structure (Cloverleaf model)
>SRA1002032	Asp	GTC
                   t      GCCA cttactcggt
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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